I decided to do the fork first. Bloody hell, it takes some time to install and get it set up! Took me an hour!!
The hardest part was fully compressing the fork and fully extending it (to establish the fork compression ratio). Each time holding the position for at least 3 seconds. Not so hard you would think, just let all the air out? But if you let too much out you get a message saying to put some air in because the pressure difference between the two extremes is too small to measure. I found some of the instructions a bit cryptic, which may have led to a poor set up. Still not sure.
I put 110psi in the fork, which was the pressure I had before. The ShockWiz reported that I had 136psi in it! Not sure how important that is. (Edit: I remembered to add the 110psi in the manner suggested by Rockshox, ie not just pump up and go).
Anyway it worked fine on the trails today. (Or did it?

)
I did a wide range of trail features and lots of them. When I stopped to check how I was getting on I had 76% on the confidence score. ShockWiz says you need at least 50% before making any recommended changes. Good enough!
It suggested that I increase low speed compression damping by one click and to increase rebound damping by one click. Also, to add more air (I added 5%). High speed compression damping and high speed rebound damping I don't have, but they were fine (green). It made no recco on air tuning (spacers) because it didn't have enough data. To get the data it wanted me to do some big jumps and drops. I didn't have the time, but I was OK with the number of spacers in the fork anyway.
I then cancelled all the records (because I had changed the fork set up) and started again. This time I got a row of greens, but still not enough data on the air tuning. But then the ShockWiz stopped talking to my phone and I suspect that it needs a new battery (the SW, not the phone).
I will replace the battery and try again. But as I now know the fork compression ratio, I'll just dial that in and skip all the hard work determining it all over again. I'm still unsure what the significance of "the baseline fork pressure" is. I wondered why it was 136psi when I only put 110psi in the fork. I wondered if it was the max pressure when fully compressed. Does anyone know for sure?
Overall
I was surprised at how long it took to set up the system.
Would have been quicker with an enthusiastic assistant.
I was pleased that it didn't suggest serious changes (my ego would have suffered).

It may be my imagination, but the fork does feel better. I need to ride it again to be certain.